STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS73796.1Transposase, IS4 family; COG: COG3385 FOG: Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87. (392 aa)    
Predicted Functional Partners:
EDS74656.1
Hypothetical protein; COG: NOG16845 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.597
EDS75941.1
ABC-2 type transporter; COG: COG1228 Imidazolonepropionase and related amidohydrolases; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.573
EDS76112.1
Putative transposase; COG: NOG06168 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.519
EDS75812.1
Putative transposase; COG: NOG06168 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.519
EDS75642.1
Putative transposase; COG: NOG06168 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.519
EDS73767.1
Putative transposase; COG: NOG06168 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.519
EDS73794.1
F5/8 type C domain protein; KEGG: cpe:CPE1364 6.7e-206 beta-N-acetylhexosaminidase K01207; COG: COG3525 N-acetyl-beta-hexosaminidase; Psort location: Extracellular, score: 9.73.
       0.438
EDS73795.1
Hypothetical protein.
       0.438
EDS75630.1
Hypothetical protein; KEGG: pfa:PF10_0224 0.00032 dynein heavy chain, putative; COG: KOG1075 FOG: Reverse transcriptase.
  
     0.401
EDS75202.1
Hypothetical protein; COG: COG5421 Transposase.
  
     0.401
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.