STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS73797.1Methyltransferase domain protein; KEGG: spt:SPA1038 1.0e-44 rrmA; rRNA guanine-N1-methyltransferase K00563; COG: COG0500 SAM-dependent methyltransferases; Psort location: Cytoplasmic, score: 8.87. (271 aa)    
Predicted Functional Partners:
EDS75105.1
KEGG: ctc:CTC01806 2.7e-209 5-methyltetrahydrofolate--homocysteine methyltransferase K00548; COG: COG1410 Methionine synthase I, cobalamin-binding domain; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.573
EDS74574.1
FAD dependent oxidoreductase; KEGG: mma:MM1656 1.6e-55 oxidoreductase K00100; COG: COG0665 Glycine/D-amino acid oxidases (deaminating); Psort location: Cytoplasmic, score: 8.87.
  
 0.536
EDS73798.1
Acetyltransferase, GNAT family; KEGG: lsl:LSL_0634 3.3e-53 phosphinothricin N-acetyltransferase K00680; COG: COG1247 Sortase and related acyltransferases; Psort location: Cytoplasmic, score: 8.87.
       0.533
EDS73800.1
RNA methyltransferase, TrmH family; KEGG: mmo:MMOB1200 1.9e-18 spoU; spoU class tRNA/rRNA methylase K03437; COG: COG0566 rRNA methylases; Psort location: Cytoplasmic, score: 8.87.
     
 0.528
EDS73799.1
Hypothetical protein; KEGG: lpl:lp_2552 0.0072 hisE; phosphoribosyl-ATP pyrophosphatase K01523; Psort location: Cytoplasmic, score: 8.87.
       0.522
EDS75777.1
Putative HAD hydrolase, family IB; KEGG: ctc:CTC01739 1.4e-29 phosphoserine phosphatase K01079; COG: COG0560 Phosphoserine phosphatase; Psort location: Cytoplasmic, score: 8.87.
 
  0.507
EDS74629.1
Alcohol dehydrogenase, iron-dependent; KEGG: msu:MS2190 0. eutG; alcohol dehydrogenase IV K00001:K04072; COG: COG1012 NAD-dependent aldehyde dehydrogenases; Psort location: Cytoplasmic, score: 9.98; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
    
 0.477
EDS74445.1
4Fe-4S binding domain protein; KEGG: tte:TTE0893 7.2e-225 nuoF; NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit K00335; COG: COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; Psort location: Cytoplasmic, score: 9.98.
  
 
 0.456
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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