STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS73809.1Acyl-ACP thioesterase; KEGG: ctc:CTC00119 1.5e-16 acyl-acyl carrier protein thioesterase K01071; COG: COG3884 Acyl-ACP thioesterase; Psort location: Cytoplasmic, score: 8.87. (247 aa)    
Predicted Functional Partners:
fabF
Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
     
 0.590
EDS73810.1
Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: sth:STH1075 4.2e-30 putative D-alanyl-D-alanine carboxypeptidase K07260; COG: COG1876 D-alanyl-D-alanine carboxypeptidase; Psort location: Cytoplasmic, score: 9.65.
       0.560
EDS73811.1
Hypothetical protein; KEGG: fnu:FN1154 0.0079 ribonuclease BN; Psort location: CytoplasmicMembrane, score: 9.26.
       0.508
EDS73807.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: spj:MGAS2096_Spy1107 3.3e-46 two-component system histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.49.
       0.419
EDS73808.1
Response regulator receiver domain protein; KEGG: eci:UTI89_C4496 2.2e-26 cpxR; transcriptional regulatory protein CpxR K07662; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
       0.419
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.