STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS73811.1Hypothetical protein; KEGG: fnu:FN1154 0.0079 ribonuclease BN; Psort location: CytoplasmicMembrane, score: 9.26. (170 aa)    
Predicted Functional Partners:
EDS73810.1
Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: sth:STH1075 4.2e-30 putative D-alanyl-D-alanine carboxypeptidase K07260; COG: COG1876 D-alanyl-D-alanine carboxypeptidase; Psort location: Cytoplasmic, score: 9.65.
       0.693
EDS73809.1
Acyl-ACP thioesterase; KEGG: ctc:CTC00119 1.5e-16 acyl-acyl carrier protein thioesterase K01071; COG: COG3884 Acyl-ACP thioesterase; Psort location: Cytoplasmic, score: 8.87.
       0.508
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.