STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS73901.1Hypothetical protein; KEGG: cpe:CPE0191 1.7e-07 nagH; hyaluronoglucosaminidase K01197; COG: COG1409 Predicted phosphohydrolases. (939 aa)    
Predicted Functional Partners:
EDS75646.1
Hypothetical protein; KEGG: cpr:CPR_0949 9.9e-09 chitinase B K01183; COG: COG3469 Chitinase.
    
 0.862
EDS73902.1
Hypothetical protein; KEGG: cpe:CPE0191 6.3e-08 nagH; hyaluronoglucosaminidase K01197; COG: NOG04032 non supervised orthologous group.
 
  
 
0.588
EDS74691.1
BNR/Asp-box repeat protein; KEGG: rba:RB3353 4.6e-10 sialidase [precursor] K01186; COG: NOG23393 non supervised orthologous group; Psort location: Extracellular, score: 9.98.
 
     0.506
EDS75733.1
LPXTG-motif cell wall anchor domain protein; KEGG: chu:CHU_3450 0.00077 CHU large protein; uncharacterized K01238; COG: COG4932 Predicted outer membrane protein; Psort location: Cellwall, score: 8.99.
  
  
  0.458
EDS73903.1
Hypothetical protein.
       0.435
EDS73904.1
Glycosyl hydrolase, family 88; COG: COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins.
       0.414
EDS74723.1
Ser/Thr phosphatase family protein; KEGG: btl:BALH_2309 1.3e-08 bacillolysin K01400; COG: COG1409 Predicted phosphohydrolases.
 
  
 
0.410
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.