STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS73902.1Hypothetical protein; KEGG: cpe:CPE0191 6.3e-08 nagH; hyaluronoglucosaminidase K01197; COG: NOG04032 non supervised orthologous group. (438 aa)    
Predicted Functional Partners:
EDS73903.1
Hypothetical protein.
      
0.727
EDS73904.1
Glycosyl hydrolase, family 88; COG: COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins.
      
0.684
EDS74691.1
BNR/Asp-box repeat protein; KEGG: rba:RB3353 4.6e-10 sialidase [precursor] K01186; COG: NOG23393 non supervised orthologous group; Psort location: Extracellular, score: 9.98.
 
    0.654
EDS75733.1
LPXTG-motif cell wall anchor domain protein; KEGG: chu:CHU_3450 0.00077 CHU large protein; uncharacterized K01238; COG: COG4932 Predicted outer membrane protein; Psort location: Cellwall, score: 8.99.
  
     0.539
EDS73901.1
Hypothetical protein; KEGG: cpe:CPE0191 1.7e-07 nagH; hyaluronoglucosaminidase K01197; COG: COG1409 Predicted phosphohydrolases.
 
   
0.532
EDS75571.1
Hypothetical protein; COG: COG3937 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.528
EDS75614.1
Hypothetical protein; COG: NOG18387 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.427
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
       0.412
atpC
ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
       0.402
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.