STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS73904.1Glycosyl hydrolase, family 88; COG: COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins. (1064 aa)    
Predicted Functional Partners:
EDS74056.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: cpf:CPF_1474 0. lacZ; beta-galactosidase K01190; COG: COG3250 Beta-galactosidase/beta-glucuronidase; Psort location: Extracellular, score: 8.07; Belongs to the glycosyl hydrolase 2 family.
 
  
  0.896
EDS74121.1
F5/8 type C domain protein; KEGG: spr:spr1536 1.2e-99 nanA; sialidase A precursor (neuraminidase A) K01186; COG: COG4409 Neuraminidase (sialidase); Psort location: Cellwall, score: 9.17.
  
  
  0.745
EDS75974.1
Hypothetical protein; KEGG: cpe:CPE1876 2.3e-61 alpha-L-fucosidase K01206; COG: COG3669 Alpha-L-fucosidase; Psort location: Cytoplasmic, score: 8.87.
 
     0.740
EDS73903.1
Hypothetical protein.
      
0.727
EDS75824.1
LPXTG-motif cell wall anchor domain protein; KEGG: smu:SMU.78 7.2e-234 fruA; fructan hydrolase; exo-beta-D-fructosidase; fructanase, FruA K03332; COG: COG1621 Beta-fructosidases (levanase/invertase); Psort location: Cellwall, score: 9.93.
 
  
  0.722
EDS74896.1
Aldose 1-epimerase; KEGG: ldb:Ldb1268 4.3e-44 putative mutarotase K01785; COG: COG2017 Galactose mutarotase and related enzymes.
 
 
 0.717
EDS73902.1
Hypothetical protein; KEGG: cpe:CPE0191 6.3e-08 nagH; hyaluronoglucosaminidase K01197; COG: NOG04032 non supervised orthologous group.
      
0.684
EDS75975.1
Hypothetical protein; KEGG: cpr:CPR_1843 3.5e-21 FucA K01206; COG: COG3669 Alpha-L-fucosidase.
 
     0.681
EDS75808.1
Putative alpha-1,2-mannosidase; KEGG: cpe:CPE0191 3.4e-08 nagH; hyaluronoglucosaminidase K01197; COG: COG3537 Putative alpha-1,2-mannosidase; Psort location: Extracellular, score: 9.98.
  
     0.668
EDS75813.1
Putative alpha-1,2-mannosidase; KEGG: cpe:CPE0191 4.7e-10 nagH; hyaluronoglucosaminidase K01197; COG: COG1404 Subtilisin-like serine proteases; Psort location: Extracellular, score: 9.73.
  
     0.642
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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