STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS73926.1Hypothetical protein; KEGG: spd:SPD_0320 6.6e-119 cps2T; glycosyl transferase, group 1 family protein, putative K00754; COG: COG0438 Glycosyltransferase. (390 aa)    
Predicted Functional Partners:
EDS73927.1
Hypothetical protein.
       0.634
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position. Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.594
EDS73925.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.570
EDS73928.1
KEGG: cpf:CPF_0715 4.1e-10 glycosyl transferase, group 2 family protein K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: Cytoplasmic, score: 8.87.
  
    0.525
EDS73929.1
Glycosyltransferase, group 2 family protein; KEGG: fth:FTH_1387 1.5e-48 glycosyltransferase K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: Cytoplasmic, score: 8.87.
  
    0.525
EDS73930.1
Glycosyltransferase, group 2 family protein; KEGG: aci:ACIAD0074 7.3e-26 putative glycosyl transferase family 2; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
    0.511
glgP
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.457
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.413
EDS74547.1
Hypothetical protein; KEGG: sbo:SBO_2558 0.0059 putative enzyme; COG: COG1073 Hydrolases of the alpha/beta superfamily.
   
   0.411
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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