STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS73994.1Hypothetical protein; COG: COG3464 Transposase and inactivated derivatives. (174 aa)    
Predicted Functional Partners:
EDS73993.1
Hypothetical protein; COG: COG3464 Transposase and inactivated derivatives.
     0.894
EDS75602.1
Hypothetical protein; COG: COG3464 Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87.
  
     0.771
EDS75289.1
Hypothetical protein; COG: COG3464 Transposase and inactivated derivatives.
  
     0.770
EDS74675.1
Transposase; KEGG: fnu:FN0522 0.0017 exonuclease SBCC K03546; COG: COG3464 Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87.
  
     0.768
EDS73792.1
Hypothetical protein; KEGG: rle:RL2023 0.00013 phaZ; putative poly(3-hydroxyalkanoate) depolymerase C precursor K01066; COG: COG4099 Predicted peptidase.
  
     0.599
EDS73995.1
Oxidoreductase, NAD-binding domain protein; KEGG: lpl:lp_2604 1.7e-81 oxidoreductase; COG: COG0673 Predicted dehydrogenases and related proteins; Psort location: Cytoplasmic, score: 8.87.
       0.454
EDS75854.1
DNA-binding helix-turn-helix protein; KEGG: mmo:MMOB3450 0.00033 dam; adenine-specific DNA methyltransferase K06223; COG: COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases); Psort location: Cytoplasmic, score: 8.87.
  
     0.448
EDS75921.1
Hypothetical protein; KEGG: fth:FTH_1859 0.0019 rbn; BN family tRNA processing ribonuclease; COG: NOG09742 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.400
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.