STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74000.1Transporter, major facilitator family protein; KEGG: bcz:BCZK2057 6.2e-05 macrolide efflux protein K00953; COG: COG2270 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score: 10.00. (406 aa)    
Predicted Functional Partners:
EDS74001.1
Hypothetical protein; COG: NOG21935 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.900
tdk
Thymidine kinase; KEGG: bha:BH3779 1.8e-63 tdk; thymidine kinase K00857; COG: COG1435 Thymidine kinase; Psort location: Cytoplasmic, score: 8.87.
    
  0.624
EDS73999.1
Hypothetical protein; KEGG: hpa:HPAG1_1423 1.3e-60 putative integral membrane protein with a TlyC-like hemolysin domain K00088; COG: COG1253 Hemolysins and related proteins containing CBS domains.
 
   
 0.593
EDS74002.1
Transcriptional regulator, Spx/MgsR family; KEGG: fnu:FN0052 7.1e-28 arsenate reductase; COG: COG1393 Arsenate reductase and related proteins, glutaredoxin family; Psort location: Cytoplasmic, score: 8.87; Belongs to the ArsC family.
       0.562
EDS73992.1
Transporter, major facilitator family protein; KEGG: bcz:BCZK2057 0.00021 macrolide efflux protein K00953; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.438
EDS74003.1
Asparaginase; KEGG: lsa:LSA1693 4.1e-87 asnA2; L-asparaginase K01424; COG: COG1446 Asparaginase; Psort location: Cytoplasmic, score: 8.87.
       0.411
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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