STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS74003.1Asparaginase; KEGG: lsa:LSA1693 4.1e-87 asnA2; L-asparaginase K01424; COG: COG1446 Asparaginase; Psort location: Cytoplasmic, score: 8.87. (330 aa)    
Predicted Functional Partners:
EDS74004.1
Hypothetical protein.
       0.718
cutC
CutC family protein; Participates in the control of copper homeostasis. Belongs to the CutC family.
 
     0.690
EDS74002.1
Transcriptional regulator, Spx/MgsR family; KEGG: fnu:FN0052 7.1e-28 arsenate reductase; COG: COG1393 Arsenate reductase and related proteins, glutaredoxin family; Psort location: Cytoplasmic, score: 8.87; Belongs to the ArsC family.
       0.553
EDS74005.1
Transcriptional regulatory protein, C-terminal domain protein; KEGG: eci:UTI89_C0420 5.1e-18 phoB; positive response regulator for pho regulon K07657; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.65.
       0.462
EDS74006.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cpf:CPF_0116 2.3e-68 sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase.
       0.462
EDS73962.1
Pyridoxal phosphate enzyme, YggS family; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
    
   0.442
EDS74007.1
KEGG: lwe:lwe2133 1.0e-74 ABC transporter, ATP-binding protein K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.82.
       0.440
EDS74008.1
Efflux ABC transporter, permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
       0.440
EDS74000.1
Transporter, major facilitator family protein; KEGG: bcz:BCZK2057 6.2e-05 macrolide efflux protein K00953; COG: COG2270 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score: 10.00.
       0.411
EDS74001.1
Hypothetical protein; COG: NOG21935 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.411
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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