STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
agcS-2Amino acid carrier protein; KEGG: hpa:HPAG1_0925 8.2e-66 D-alanine glycine permease K01613; COG: COG1115 Na+/alanine symporter; Psort location: CytoplasmicMembrane, score: 10.00. (467 aa)    
Predicted Functional Partners:
EDS74038.1
FAD dependent oxidoreductase; KEGG: gox:GOX1630 3.0e-13 putative oxidoreductase K00100; COG: COG2509 Uncharacterized FAD-dependent dehydrogenases.
     
 0.539
EDS74037.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.538
EDS75964.1
COG: COG3819 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.26.
   
    0.453
EDS76096.1
Putative ATP synthase F0, A subunit; KEGG: cpr:CPR_1400 1.8e-118 chloride channel protein K01529; COG: COG0038 Chloride channel protein EriC; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.452
EDS73831.1
CDP-alcohol phosphatidyltransferase; KEGG: cac:CAC0798 1.2e-27 phosphatidylserine synthase K00998; COG: COG1183 Phosphatidylserine synthase; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.433
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.