STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74040.1Hypothetical protein; KEGG: oih:OB2932 7.8e-70 truncated lactocepin precursor K01361; COG: COG1404 Subtilisin-like serine proteases; Psort location: Cellwall, score: 9.18. (1539 aa)    
Predicted Functional Partners:
EDS76081.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 0.942
EDS74739.1
TIGR02677 family protein; KEGG: fnu:FN0522 0.0032 exonuclease SBCC K03546; COG: NOG04769 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
 0.942
EDS74317.1
Hypothetical protein; COG: NOG23360 non supervised orthologous group.
  
 0.942
EDS74318.1
Hypothetical protein; COG: NOG23360 non supervised orthologous group.
  
 0.942
EDS73879.1
Peptidase, S41 family; KEGG: gka:GK3092 7.3e-65 carboxyl-terminal processing protease; COG: COG0793 Periplasmic protease; Belongs to the peptidase S41A family.
  
 
 0.874
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
  
 
  0.853
EDS73902.1
Hypothetical protein; KEGG: cpe:CPE0191 6.3e-08 nagH; hyaluronoglucosaminidase K01197; COG: NOG04032 non supervised orthologous group.
 
 
 
0.832
EDS76003.1
Trypsin; KEGG: bsu:BG11054 1.1e-70 yyxA, yycK; similar to serine protease Do; COG: COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
  
 
 0.651
EDS75004.1
FtsK/SpoIIIE family protein; KEGG: pen:PSEEN2212 1.2e-101 ftsK; cell division protein FtsK; COG: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.582
secY
Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
    
 
 0.577
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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