STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74048.1KEGG: sak:SAK_1196 2.1e-32 potA; spermidine/putrescine ABC transporter, ATP-binding protein K02052; COG: COG1122 ABC-type cobalt transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49. (515 aa)    
Predicted Functional Partners:
EDS74049.1
Hypothetical protein; COG: NOG18064 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
     0.994
EDS74047.1
COG: COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters; Psort location: CytoplasmicMembrane, score: 9.99.
 0.988
EDS74544.1
COG: COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.953
EDS74046.1
Hypothetical protein; KEGG: pha:PSHAa0364 0.0073 carboxyl-terminal protease K03797; COG: COG1843 Flagellar hook capping protein.
 
     0.947
EDS76128.1
COG: COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.936
EDS76126.1
Hypothetical protein; COG: COG1122 ABC-type cobalt transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.832
EDS74050.1
LPXTG-motif cell wall anchor domain protein; KEGG: pfa:PFE0675c 2.3e-05 deoxyribodipyrimidine photolyase (photoreactivating enzyme, DNA photolyase), putative K01669; COG: COG1404 Subtilisin-like serine proteases; Psort location: Cellwall, score: 9.98.
  
    0.693
EDS73756.1
KEGG: rha:RHA1_ro09047 8.5e-06 ABC peptide transporter, permease component K02033; COG: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.610
ecfA
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
0.602
ecfA-2
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
0.597
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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