STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74072.1Transcriptional regulator, MarR family; KEGG: fnu:FN0362 0.0016 ATP synthase B chain, sodium ion specific K02109; COG: NOG16844 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (143 aa)    
Predicted Functional Partners:
EDS74073.1
Putative CoA-substrate-specific enzyme activase; KEGG: rpc:RPC_1027 2.7e-19 benzoyl-CoA reductase, subunit A K04114; COG: COG3580 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87.
  
    0.771
EDS74255.1
Transcriptional regulator, MarR family; COG: NOG16844 non supervised orthologous group; Psort location: Cytoplasmic, score: 9.98.
  
     0.673
EDS74071.1
O-antigen polymerase; KEGG: sdy:SDY_4054 2.7e-06 waaL; lipid A-core:surface polymer ligase WaaL K02847; COG: NOG36355 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
       0.527
EDS74074.1
Ser/Thr phosphatase family protein; KEGG: hpa:HPAG1_0403 1.8e-22 integral membrane protein; COG: COG1408 Predicted phosphohydrolases; Psort location: CytoplasmicMembrane, score: 9.97.
       0.473
EDS75919.1
Hypothetical protein; KEGG: tbd:Tbd_2668 2.4e-12 phosphoribosylaminoimidazole-succinocarboxamide (SAICAR) synthetase K01923; COG: COG0628 Predicted permease; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.470
EDS74256.1
KEGG: reh:H16_A0776 2.5e-71 ABC-type transporter, ATPase and permease components: Prot2E family; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 0.435
EDS75346.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: bce:BC0791 4.5e-136 NADH dehydrogenase K00359; COG: COG0607 Rhodanese-related sulfurtransferase; Psort location: Cytoplasmic, score: 9.65; Belongs to the sulfur carrier protein TusA family.
  
  
 0.426
EDS75301.1
COG: COG4932 Predicted outer membrane protein; Psort location: Cellwall, score: 9.94.
  
     0.409
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.406
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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