STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74072.1Transcriptional regulator, MarR family; KEGG: fnu:FN0362 0.0016 ATP synthase B chain, sodium ion specific K02109; COG: NOG16844 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (143 aa)    
Predicted Functional Partners:
EDS75491.1
Hypothetical protein; KEGG: sha:SH0521 2.0e-10 ptsG; phosphotransferase system enzyme II K02777:K02778:K02779; COG: COG2190 Phosphotransferase system IIA components.
   
 
 0.868
EDS73779.1
KEGG: sar:SAR0235 1.9e-137 putative PTS transport system, IIBC component K02790:K02791; COG: COG1264 Phosphotransferase system IIB components; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.868
EDS74073.1
Putative CoA-substrate-specific enzyme activase; KEGG: rpc:RPC_1027 2.7e-19 benzoyl-CoA reductase, subunit A K04114; COG: COG3580 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87.
  
    0.781
nagE
KEGG: sgl:SG0859 6.9e-140 PTS system N-acetylglucosamine-specific IIABC component K02802:K02803:K02804; COG: COG2190 Phosphotransferase system IIA components; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.735
EDS74255.1
Transcriptional regulator, MarR family; COG: NOG16844 non supervised orthologous group; Psort location: Cytoplasmic, score: 9.98.
  
     0.673
EDS74071.1
O-antigen polymerase; KEGG: sdy:SDY_4054 2.7e-06 waaL; lipid A-core:surface polymer ligase WaaL K02847; COG: NOG36355 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
       0.527
EDS74074.1
Ser/Thr phosphatase family protein; KEGG: hpa:HPAG1_0403 1.8e-22 integral membrane protein; COG: COG1408 Predicted phosphohydrolases; Psort location: CytoplasmicMembrane, score: 9.97.
       0.473
EDS75919.1
Hypothetical protein; KEGG: tbd:Tbd_2668 2.4e-12 phosphoribosylaminoimidazole-succinocarboxamide (SAICAR) synthetase K01923; COG: COG0628 Predicted permease; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.470
EDS74256.1
KEGG: reh:H16_A0776 2.5e-71 ABC-type transporter, ATPase and permease components: Prot2E family; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 9.99.
 
   
 0.430
EDS75301.1
COG: COG4932 Predicted outer membrane protein; Psort location: Cellwall, score: 9.94.
  
     0.409
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.