STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
licALichenan-specific phosphotransferase enzyme IIA component; KEGG: bca:BCE_5319 5.0e-27 celC; PTS system, cellobiose-specific IIA component K02759; COG: COG1447 Phosphotransferase system cellobiose-specific component IIA; Psort location: Cytoplasmic, score: 9.98. (102 aa)    
Predicted Functional Partners:
EDS74932.1
KEGG: lmf:LMOf2365_2752 2.9e-22 PTS system, cellobiose-specific, IIB component K02760; COG: COG1440 Phosphotransferase system cellobiose-specific component IIB.
 
 0.995
EDS74931.1
KEGG: cpr:CPR_2602 1.1e-24 PTS system, IIB component K02760; COG: COG1440 Phosphotransferase system cellobiose-specific component IIB; Psort location: Cytoplasmic, score: 9.98.
 
 0.982
EDS75875.1
PTS system, Lactose/Cellobiose specific IIB subunit; KEGG: lpl:lp_1399 1.0e-10 pts15B; beta-glucosides PTS, EIIB K02760; COG: COG1440 Phosphotransferase system cellobiose-specific component IIB; Psort location: Cytoplasmic, score: 9.98.
 
 0.976
EDS74791.1
Hypothetical protein; KEGG: lwe:lwe0330 7.3e-10 PTS system, beta-glucoside-specific, IIB component K00890; COG: COG1440 Phosphotransferase system cellobiose-specific component IIB; Psort location: Cytoplasmic, score: 8.87.
 
 0.968
EDS75433.1
Hypothetical protein; KEGG: lwe:lwe0330 4.0e-09 PTS system, beta-glucoside-specific, IIB component K00890; COG: COG1440 Phosphotransferase system cellobiose-specific component IIB.
 
 0.964
EDS76125.1
Phosphocarrier, HPr family; KEGG: btl:BALH_3665 3.0e-20 ptsH; phosphocarrier protein HPr K00889; COG: COG1925 Phosphotransferase system, HPr-related proteins; Psort location: Cytoplasmic, score: 10.00.
   
 0.933
EDS75539.1
PRD domain protein; KEGG: spk:MGAS9429_Spy1126 1.1e-15 PTS system, mannitol (cryptic)-specific IIA component K00890; COG: COG3711 Transcriptional antiterminator.
 
  
 0.827
ptsH
Phosphocarrier protein HPr; KEGG: btl:BALH_3665 4.8e-13 ptsH; phosphocarrier protein HPr K00889; COG: COG1925 Phosphotransferase system, HPr-related proteins; Psort location: Cytoplasmic, score: 10.00.
   
 0.745
pfkB
1-phosphofructokinase; KEGG: cno:NT01CX_1725 1.1e-79 1-phosphofructokinase K00882; COG: COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Psort location: Cytoplasmic, score: 8.87; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
  
 0.719
EDS75601.1
M protein trans-acting positive regulator (MGA) HTH domain protein; KEGG: spk:MGAS9429_Spy1126 1.7e-06 PTS system, mannitol (cryptic)-specific IIA component K00890; COG: COG3711 Transcriptional antiterminator; Psort location: CytoplasmicMembrane, score: 7.80.
 
  
 0.662
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.