STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP12360.1KEGG: sak:SAK_0393 7.8e-21 Cof-like hydrolase/peptidyl-prolyl cis-trans isomerase domain protein; COG: COG0561 Predicted hydrolases of the HAD superfamily; Psort location: Cytoplasmic, score:8.87. (266 aa)    
Predicted Functional Partners:
EDP12361.1
Aldose 1-epimerase; KEGG: ldb:Ldb1268 2.6e-30 putative mutarotase K01785; COG: COG2017 Galactose mutarotase and related enzymes; Psort location: Cytoplasmic, score:8.87.
     
 0.792
EDP12160.1
Cof-like hydrolase; KEGG: ecc:c0907 4.5e-17 ybiV; putative sugar phosphatase K07757; COG: COG0561 Predicted hydrolases of the HAD superfamily; Psort location: Cytoplasmic, score:8.87.
  
     0.773
EDP10744.1
Cof-like hydrolase; KEGG: eci:UTI89_C4247 1.9e-27 yidA; hypothetical protein; COG: COG0561 Predicted hydrolases of the HAD superfamily; Psort location: Cytoplasmic, score:8.87.
  
     0.773
EDP11911.1
Cof-like hydrolase; KEGG: btl:BALH_4896 2.5e-32 hydrolase, haloacid dehalogenase-like family K01564; COG: COG0561 Predicted hydrolases of the HAD superfamily; Psort location: Cytoplasmic, score:8.87.
  
     0.772
nagB
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
     
 0.614
EDP10853.1
Phosphoribulokinase/uridine kinase family protein; KEGG: ctc:CTC00344 2.1e-106 uridine kinase K00876; COG: COG0572 Uridine kinase; Psort location: Cytoplasmic, score:8.87.
  
 
  0.584
ribF
Riboflavin biosynthesis protein RibF; KEGG: bha:BH2409 2.3e-52 ribC; riboflavin kinase / FAD synthase K00861:K00953; COG: COG0196 FAD synthase; Psort location: Cytoplasmic, score:8.87; Belongs to the ribF family.
   
 0.509
EDP10796.1
KEGG: ecp:ECP_1762 2.8e-49 PTS system, mannose-specific IID component K02796; COG: COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC; Psort location: CytoplasmicMembrane, score:10.00.
    
  0.491
EDP10819.1
Alpha amylase, catalytic domain protein; KEGG: fal:FRAAL2309 8.1e-59 cyclomaltodextrinase K01208; COG: COG0366 Glycosidases; Psort location: Cytoplasmic, score:9.98.
    
 0.474
EDP10404.1
Hypothetical protein; KEGG: ftf:FTF1462c 9.4e-65 wbtC; UDP-glucose 4-epimerase K01784; COG: COG0451 Nucleoside-diphosphate-sugar epimerases; Psort location: Cytoplasmic, score:8.87.
   
 0.467
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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