STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP12311.1Hypothetical protein; Psort location: Cytoplasmic, score:8.87. (85 aa)    
Predicted Functional Partners:
EDP12310.1
Hypothetical protein; COG: NOG36404 non supervised orthologous group.
 
     0.949
EDP12305.1
CHC2 zinc finger domain protein; KEGG: ilo:IL2201 1.5e-11 dnaG; DNA primase K02316; COG: NOG17367 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
 
     0.928
EDP12304.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
 
     0.844
EDP12307.1
DNA topoisomerase; KEGG: efa:EF2312 2.0e-204 topB-2; DNA topoisomerase III K03169; COG: COG0550 Topoisomerase IA; Psort location: Cytoplasmic, score:8.87.
 
     0.808
EDP12309.1
Hypothetical protein.
       0.785
EDP11838.1
Hypothetical protein; COG: NOG36404 non supervised orthologous group.
 
     0.785
EDP12306.1
Hypothetical protein.
       0.783
EDP11840.1
Hypothetical protein; KEGG: sfl:SF1683 0.0031 ydhO; putative lipoprotein K01183; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
 
     0.783
EDP12308.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
       0.782
EDP11077.1
Hypothetical protein; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins); Psort location: Cytoplasmic, score:8.87.
 
     0.779
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.