STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP12234.1Hypothetical protein; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00. (378 aa)    
Predicted Functional Partners:
EDP11540.1
Chorismate mutase; KEGG: det:DET0461 5.9e-40 tyrA; chorismate mutase / prephenate dehydratase K04093:K04518; COG: COG0077 Prephenate dehydratase; Psort location: Cytoplasmic, score:9.98.
  
 
 0.787
EDP11403.1
Putative L-serine ammonia-lyase; KEGG: bfr:BF1265 9.9e-93 L-serine dehydratase K01752; COG: COG1760 L-serine deaminase; Psort location: Cytoplasmic, score:8.87.
   
 
 0.661
EDP11139.1
Transporter, major facilitator family protein; KEGG: psb:Psyr_2895 0.0011 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:9.99.
  
  
 0.604
EDP11596.1
Methyltransferase domain protein; KEGG: btk:BT9727_3407 2.6e-19 possible ubiquinone/menaquinone methyltransferase K00599; COG: COG0500 SAM-dependent methyltransferases; Psort location: Cytoplasmic, score:8.87.
 
  
 0.591
EDP10566.1
COG: COG2270 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00.
  
  
 0.585
EDP12233.1
Hypothetical protein; KEGG: bcz:BCZK5105 4.1e-55 hydrolase, haloacid dehalogenase-like family; possible 2-haloacid dehalogenase K01560; COG: COG1011 Predicted hydrolase (HAD superfamily); Psort location: Cytoplasmic, score:8.87.
 
     0.568
EDP10351.1
KEGG: ldb:Ldb1350 8.7e-62 homoserine dehydrogenase K00003; COG: COG0460 Homoserine dehydrogenase; Psort location: Cytoplasmic, score:8.87.
   
  0.544
EDP11789.1
Methyltransferase domain protein; KEGG: rty:RT0613 3.3e-09 ubiG; 3-demethylubiquinone-9 3-methyltransferase K00568; COG: COG0500 SAM-dependent methyltransferases; Psort location: Cytoplasmic, score:8.87.
   
 
 0.524
EDP11895.1
Phospholipase D domain protein; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
  
 
 0.520
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
  
 
  0.506
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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