STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP12238.1KEGG: mbu:Mbur_0360 3.2e-12 protein-glutamate methylesterase; COG: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; Psort location: Cytoplasmic, score:9.98. (498 aa)    
Predicted Functional Partners:
EDP12237.1
KEGG: ecp:ECP_2406 1.0e-31 hypothetical protein YpdA K07704; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; Psort location: Cytoplasmic, score:8.87.
 
 
 0.990
EDP12236.1
Hypothetical protein; COG: COG1879 ABC-type sugar transport system, periplasmic component; Psort location: Cytoplasmic, score:8.87.
 
  
  0.946
EDP10167.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cpf:CPF_0554 1.2e-82 sensor histidine kinase K07718; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
 
 0.924
EDP10168.1
Response regulator receiver domain protein; KEGG: ava:Ava_2028 1.6e-17 two component transcriptional regulator, LuxR family; COG: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; Psort location: Cytoplasmic, score:9.98.
  
  
 
0.811
EDP11111.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: tte:TTE2688 4.1e-48 baeS12; sensory transduction histidine kinases K07652; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:9.49.
 
 
 0.740
EDP11222.1
Response regulator receiver domain protein; KEGG: eci:UTI89_C5174 7.4e-17 arcA; ArcA transcriptional dual regulator K07773; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score:9.98.
  
  
 0.717
EDP11110.1
Response regulator receiver domain protein; KEGG: ava:Ava_3369 3.7e-38 two component transcriptional regulator, winged helix family; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score:9.98.
  
  
 0.711
EDP12341.1
Response regulator receiver domain protein; KEGG: fal:FRAAL1628 3.1e-41 response regulator in two-component regulatory system; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score:9.98.
  
  
 0.691
EDP11670.1
Response regulator receiver domain protein; KEGG: sac:SACOL2071 3.5e-42 kdpE; DNA-binding response regulator KdpE; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score:9.98.
  
  
 0.689
EDP12342.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bcl:ABC1176 6.7e-39 two-component sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:7.84.
 
  
  0.687
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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