STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP12266.1Hypothetical protein. (43 aa)    
Predicted Functional Partners:
EDP12267.1
Hypothetical protein; KEGG: cno:NT01CX_0158 7.5e-05 putative undecaprenol kinase 2 (bacitracin resistanceprotein 2) K00887; COG: COG2035 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:9.99.
       0.438
EDP12268.1
Glycerophosphodiester phosphodiesterase family protein; KEGG: ser:SERP0710 1.3e-35 glycerophosphoryl diester phosphodiesterase, putative K01126; COG: COG0584 Glycerophosphoryl diester phosphodiesterase; Psort location: Cytoplasmic, score:8.87.
       0.438
EDP12265.1
Hypothetical protein; COG: NOG28722 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.99.
       0.425
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.