STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP12114.1PRD domain protein; COG: COG3711 Transcriptional antiterminator; Psort location: Cytoplasmic, score:8.87. (162 aa)    
Predicted Functional Partners:
EDP12115.1
Phosphotransferase system, EIIC; KEGG: lpl:lp_3133 3.1e-73 pts24BCA; beta-glucosides PTS, EIIBCA K02755:K02756:K02757; COG: COG2190 Phosphotransferase system IIA components; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 
 0.949
EDP10189.1
Phosphotransferase system, EIIC; KEGG: btk:BT9727_0877 5.2e-80 bglP; probable PTS system, beta-glucoside-specific enzyme II, ABC component K02755:K02756:K02757; COG: COG2190 Phosphotransferase system IIA components; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 0.935
EDP11738.1
Phosphotransferase system, EIIC; KEGG: lpl:lp_0886 1.3e-115 pts11BC; beta-glucosides PTS, EIIBC K02756:K02757; COG: COG1264 Phosphotransferase system IIB components; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 0.871
bglH
KEGG: bsu:BG10935 1.6e-133 bglH, n17D; beta-glucosidase K01188; COG: KOG0626 Beta-glucosidase, lactase phlorizinhydrolase, and related proteins; Psort location: Cytoplasmic, score:9.65; Belongs to the glycosyl hydrolase 1 family.
 
  
 0.827
ptbA
KEGG: ldb:Ldb1823 5.0e-27 PTS system, glucose/glucoside-specific enzyme IIA component K00890; COG: COG2190 Phosphotransferase system IIA components; Psort location: CytoplasmicMembrane, score:9.49.
   
 
 0.808
EDP10358.1
Phosphotransferase system, EIIC; KEGG: lpl:lp_3133 3.1e-73 pts24BCA; beta-glucosides PTS, EIIBCA K02755:K02756:K02757; COG: COG2190 Phosphotransferase system IIA components; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 
 0.786
ptbA-5
PTS system, glucose subfamily, IIA component; KEGG: lac:LBA0401 4.1e-29 scrA; sucrose PTS II ABC K02808:K02809:K02810; COG: COG2190 Phosphotransferase system IIA components; Psort location: Cytoplasmic, score:9.98.
  
 
 0.747
EDP12118.1
KEGG: sak:SAK_0393 4.1e-08 Cof-like hydrolase/peptidyl-prolyl cis-trans isomerase domain protein; COG: COG0561 Predicted hydrolases of the HAD superfamily; Psort location: Cytoplasmic, score:8.87.
       0.746
EDP10327.1
Putative licABCH operon regulator; KEGG: spb:M28_Spy1064 1.7e-38 PTS system, mannitol (cryptic)-specific IIA component K00890; COG: COG3711 Transcriptional antiterminator; Psort location: Cytoplasmic, score:8.87.
 
 
 0.621
ptsH
Phosphocarrier protein HPr; KEGG: btl:BALH_3665 2.4e-18 ptsH; phosphocarrier protein HPr K00889; COG: COG1925 Phosphotransferase system, HPr-related proteins; Psort location: Cytoplasmic, score:10.00.
   
 0.548
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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