STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP12079.1Hypothetical protein; COG: COG3589 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.87. (362 aa)    
Predicted Functional Partners:
EDP12074.1
Putative PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
  
 0.765
EDP10322.1
PTS system, Lactose/Cellobiose specific IIA subunit; KEGG: cpr:CPR_2600 1.6e-21 phosphotransferase system enzyme II, PtcA K02759; COG: COG1447 Phosphotransferase system cellobiose-specific component IIA; Psort location: Cytoplasmic, score:9.98.
 
    0.739
EDP12078.1
Hypothetical protein; COG: NOG17349 non supervised orthologous group.
       0.723
EDP11631.1
PTS system, Lactose/Cellobiose specific IIA subunit; KEGG: sha:SH0190 4.5e-17 hypothetical protein K02759; COG: COG1447 Phosphotransferase system cellobiose-specific component IIA; Psort location: Cytoplasmic, score:9.98.
 
    0.716
EDP12080.1
KEGG: bcz:BCZK3111 2.2e-09 transcriptional regulator, GntR family; COG: COG2188 Transcriptional regulators; Psort location: Cytoplasmic, score:8.87.
  
    0.691
EDP12073.1
PTS system, Lactose/Cellobiose specific IIB subunit; KEGG: lmo:lmo2373 9.9e-22 similar to phosphotransferase system (PTS) beta-glucoside-specific enzyme IIB component K02760; COG: COG1440 Phosphotransferase system cellobiose-specific component IIB; Psort location: Cytoplasmic, score:9.98.
 
     0.689
EDP11473.1
KEGG: spd:SPD_1833 3.6e-17 PTS system, IIA component K00924; COG: COG1447 Phosphotransferase system cellobiose-specific component IIA; Psort location: Cytoplasmic, score:9.98.
 
    0.686
EDP10332.1
Putative PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
  
 0.685
EDP12075.1
PTS system, Lactose/Cellobiose specific IIA subunit; KEGG: cpr:CPR_2600 9.9e-22 phosphotransferase system enzyme II, PtcA K02759; COG: COG1447 Phosphotransferase system cellobiose-specific component IIA; Psort location: Cytoplasmic, score:9.98.
 
    0.681
EDP11634.1
KEGG: spb:M28_Spy1063 2.0e-16 PTS system, cellobiose-specific IIB component K02760; COG: COG1440 Phosphotransferase system cellobiose-specific component IIB; Psort location: Cytoplasmic, score:9.65.
 
     0.671
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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