STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP12088.1Putative permease; KEGG: hpa:HPAG1_1114 5.2e-06 hypothetical protein K00760; COG: COG2233 Xanthine/uracil permeases; Psort location: CytoplasmicMembrane, score:10.00. (462 aa)    
Predicted Functional Partners:
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
  
 0.949
EDP12095.1
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein; KEGG: hma:pNG7246 5.4e-133 xdhD2; possible hypoxanthine oxidase XdhD; COG: COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs; Psort location: Cytoplasmic, score:8.87.
 
   
 0.868
EDP12093.1
FAD binding domain in molybdopterin dehydrogenase; KEGG: ape:APE_2219 1.7e-10 292aa long hypothetical nicotine dehydrogenase chain A K03519; COG: COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs; Psort location: Cytoplasmic, score:8.87.
 
   
 0.859
EDP12096.1
Hypothetical protein; KEGG: hma:pNG7236 7.6e-15 glmU; UDP-N-acetylglucosamine pyrophosphorylase K00972; COG: COG2068 Uncharacterized MobA-related protein; Psort location: Cytoplasmic, score:8.87.
 
   
 0.840
EDP12094.1
2Fe-2S iron-sulfur cluster-binding domain protein; KEGG: sto:ST0561 2.3e-29 carbon monoxide dehydrogenase K03518; COG: COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs; Psort location: Cytoplasmic, score:8.87.
 
  
 0.838
purE
Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
  
  
 0.808
EDP11683.1
Phosphoribosylformylglycinamidine synthase; KEGG: cac:CAC1655 0. purQ, purL; bifunctional enzyme phosphoribosylformylglycinamidine (FGAM) synthase (synthetase domain/glutamine amidotransferase domain) K01952; COG: COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain; Psort location: Cytoplasmic, score:8.87.
  
  
 0.807
EDP12089.1
Hypothetical protein; COG: COG1618 Predicted nucleotide kinase; Psort location: Cytoplasmic, score:8.87.
       0.784
EDP12091.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; COG: COG0609 ABC-type Fe3+-siderophore transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.784
EDP12090.1
Periplasmic binding protein; COG: COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
       0.783
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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