STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP11866.1Hypothetical protein. (166 aa)    
Predicted Functional Partners:
EDP11865.1
TraG/TraD family protein; COG: COG3505 Type IV secretory pathway, VirD4 components; Psort location: Cytoplasmic, score:8.87.
 
     0.937
EDP11868.1
Hypothetical protein; COG: NOG34358 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
 
     0.857
EDP11863.1
Hypothetical protein.
 
     0.815
EDP11072.1
Hypothetical protein; COG: NOG28113 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.99.
 
    0.778
EDP11845.1
Hypothetical protein; COG: NOG28113 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.99.
 
    0.777
EDP11077.1
Hypothetical protein; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins); Psort location: Cytoplasmic, score:8.87.
 
     0.764
EDP10378.1
Hypothetical protein; COG: COG3843 Type IV secretory pathway, VirD2 components (relaxase); Psort location: Cytoplasmic, score:8.87.
  
     0.754
EDP12211.1
Relaxase/mobilization nuclease domain protein; COG: COG3843 Type IV secretory pathway, VirD2 components (relaxase); Psort location: Cytoplasmic, score:8.87.
  
     0.753
EDP11065.1
Hypothetical protein; COG: NOG34358 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
 
     0.753
EDP11069.1
TraG/TraD family protein; COG: COG3505 Type IV secretory pathway, VirD4 components; Psort location: Cytoplasmic, score:8.87.
 
     0.735
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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