STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP11870.1ParB-like protein; KEGG: pub:SAR11_0354 9.5e-10 parB; chromosome partitioning protein K03497; COG: COG1475 Predicted transcriptional regulators; Psort location: Cytoplasmic, score:8.87; Belongs to the ParB family. (309 aa)    
Predicted Functional Partners:
EDP11871.1
CobQ/CobB/MinD/ParA nucleotide binding domain protein; KEGG: rru:Rru_A3627 3.0e-45 cobyrinic acid a,c-diamide synthase K03496; COG: COG1192 ATPases involved in chromosome partitioning; Psort location: Cytoplasmic, score:8.87.
 
 0.987
EDP11061.1
CobQ/CobB/MinD/ParA nucleotide binding domain protein; KEGG: fal:FRAAL2247 3.3e-46 chromosome partitioning protein (partial match) K08253; COG: COG1192 ATPases involved in chromosome partitioning; Psort location: Cytoplasmic, score:8.87.
 
 0.948
soj
Sporulation initiation inhibitor protein Soj; KEGG: cch:Cag_1803 1.1e-63 ATPase, ParA family K03496; COG: COG1192 ATPases involved in chromosome partitioning.
 
 0.856
EDP11869.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
       0.766
EDP11866.1
Hypothetical protein.
 
     0.675
gidB
16S rRNA methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.657
EDP11868.1
Hypothetical protein; COG: NOG34358 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
 
     0.643
EDP10378.1
Hypothetical protein; COG: COG3843 Type IV secretory pathway, VirD2 components (relaxase); Psort location: Cytoplasmic, score:8.87.
 
  
 0.591
EDP12211.1
Relaxase/mobilization nuclease domain protein; COG: COG3843 Type IV secretory pathway, VirD2 components (relaxase); Psort location: Cytoplasmic, score:8.87.
 
  
 0.590
EDP11865.1
TraG/TraD family protein; COG: COG3505 Type IV secretory pathway, VirD4 components; Psort location: Cytoplasmic, score:8.87.
 
   
 0.525
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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