STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP11921.1COG: COG2834 Outer membrane lipoprotein-sorting protein; Psort location: Cytoplasmic, score:8.87. (328 aa)    
Predicted Functional Partners:
EDP11480.1
KEGG: pen:PSEEN3042 5.8e-62 macB; macrolide ABC efflux protein MacB; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score:10.00.
   
 
 0.989
EDP10309.1
Efflux ABC transporter, permease protein; KEGG: cal:orf19.3100 7.7e-06 USO4; coiled-coil protein necessary for protein transport from ER to Golgi K01553; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score:9.82.
   
 
 0.847
EDP10315.1
N-acetylmuramoyl-L-alanine amidase; KEGG: gka:GK0142 4.0e-41 germination-specific N-acetylmuramoyl-L-alanine amidase (cell wall hydrolase) (autolysin) K01448; COG: COG0860 N-acetylmuramoyl-L-alanine amidase; Psort location: Cytoplasmic, score:8.87.
    
 
 0.843
EDP10763.1
Efflux ABC transporter, permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score:9.99.
   
 
 0.835
EDP10130.1
Efflux ABC transporter, permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score:9.99.
   
 
 0.835
EDP11146.1
Putative bacteriocin export ABC transporter, lactococcin 972 group; KEGG: ecc:c2331 2.4e-34 yecC; hypothetical amino-acid ABC transporter ATP-binding protein yecC K02028; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score:9.49.
   
 
 0.822
EDP11224.1
KEGG: lwe:lwe2133 1.8e-70 ABC transporter, ATP-binding protein K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score:9.49.
   
 
 0.822
EDP10421.1
Hypothetical protein; KEGG: cjr:CJE0345 1.4e-06 modC; molybdenum ABC transporter, ATP-binding protein K02017; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score:9.97.
   
 
 0.822
EDP10762.1
Putative bacteriocin export ABC transporter, lactococcin 972 group; KEGG: lwe:lwe2133 2.3e-68 ABC transporter, ATP-binding protein K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score:9.49.
   
 
 0.822
EDP10129.1
KEGG: lwe:lwe2133 1.7e-74 ABC transporter, ATP-binding protein K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score:9.49.
   
 
 0.822
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.