STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP11940.1Acetyltransferase, GNAT family; KEGG: aae:aq_567 6.6e-09 rimI; ribosomal-protein-alanine acetyltransferase K03789; COG: NOG17857 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87. (190 aa)    
Predicted Functional Partners:
nadE
NAD+ synthase; KEGG: tte:TTE0640 9.4e-49 nadE; NAD synthase K01950; COG: COG0388 Predicted amidohydrolase; Belongs to the NAD synthetase family.
  
 
  0.855
EDP11939.1
Oxidoreductase; COG: NOG16874 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
  
    0.801
EDP11941.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score:9.97.
  
    0.780
EDP11938.1
Putative bacteriocin transport accessory protein; KEGG: cal:orf19.1976 0.00015 TRX1; thioredoxin II K01829; Psort location: Cytoplasmic, score:8.87.
       0.693
bdhA
KEGG: cac:CAC3299 1.2e-128 bdhA; NADH-dependent butanol dehydrogenase A (BDH I) K00100; COG: COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family; Psort location: Cytoplasmic, score:9.98.
   
  
 0.631
EDP11785.1
DJ-1/PfpI family protein; KEGG: bcz:BCZK3357 6.3e-20 thiJ; 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; COG: COG0693 Putative intracellular protease/amidase; Psort location: Cytoplasmic, score:8.87.
   
    0.577
EDP11942.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
       0.560
EDP11943.1
Hypothetical protein.
       0.560
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
   
 
  0.514
EDP10614.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: afu:AF1262 3.5e-97 noxB-2; NADH oxidase (NoxB-2) K00359; COG: COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Psort location: Cytoplasmic, score:8.87.
  
 
  0.501
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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