STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP11941.1Hypothetical protein; Psort location: CytoplasmicMembrane, score:9.97. (218 aa)    
Predicted Functional Partners:
EDP11940.1
Acetyltransferase, GNAT family; KEGG: aae:aq_567 6.6e-09 rimI; ribosomal-protein-alanine acetyltransferase K03789; COG: NOG17857 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
  
    0.780
EDP11939.1
Oxidoreductase; COG: NOG16874 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
  
    0.752
EDP11938.1
Putative bacteriocin transport accessory protein; KEGG: cal:orf19.1976 0.00015 TRX1; thioredoxin II K01829; Psort location: Cytoplasmic, score:8.87.
       0.693
EDP11942.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
       0.560
EDP11943.1
Hypothetical protein.
       0.560
EDP11937.1
Kinase, PfkB family; KEGG: ser:SERP1494 1.6e-78 fructokinase, putative K00847; COG: COG0524 Sugar kinases, ribokinase family; Psort location: Cytoplasmic, score:9.98; Belongs to the carbohydrate kinase PfkB family.
  
    0.406
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.