STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP11442.1Hypothetical protein; Psort location: Cytoplasmic, score:8.87. (142 aa)    
Predicted Functional Partners:
EDP11444.1
Hypothetical protein; KEGG: pol:Bpro_5394 1.0e-13 RNA-directed DNA polymerase K00986; COG: COG3344 Retron-type reverse transcriptase; Psort location: Cytoplasmic, score:8.87.
       0.664
ptbA-2
PTS system, glucose subfamily, IIA component; KEGG: sha:SH1484 1.2e-25 phosphotransferase system enzyme IIA-like protein K02777; COG: COG2190 Phosphotransferase system IIA components; Psort location: Cytoplasmic, score:9.98.
       0.565
EDP11445.1
Group II intron, maturase-specific domain protein; KEGG: pol:Bpro_5394 7.8e-45 RNA-directed DNA polymerase K00986; COG: COG3344 Retron-type reverse transcriptase.
       0.462
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.