node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDP11528.1 | FbpA | EUBDOL_00706 | EUBDOL_01909 | S4 domain protein; KEGG: sag:SAG1593 0.0014 rluB; ribosomal large subunit pseudouridine synthase B K06178; COG: COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); Psort location: Cytoplasmic, score:8.87. | COG: COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP; Psort location: Cytoplasmic, score:8.87. | 0.929 |
EDP11528.1 | rplB | EUBDOL_00706 | EUBDOL_00562 | S4 domain protein; KEGG: sag:SAG1593 0.0014 rluB; ribosomal large subunit pseudouridine synthase B K06178; COG: COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); Psort location: Cytoplasmic, score:8.87. | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.877 |
EDP11528.1 | rplM | EUBDOL_00706 | EUBDOL_00430 | S4 domain protein; KEGG: sag:SAG1593 0.0014 rluB; ribosomal large subunit pseudouridine synthase B K06178; COG: COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); Psort location: Cytoplasmic, score:8.87. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.881 |
EDP11528.1 | rplN | EUBDOL_00706 | EUBDOL_00555 | S4 domain protein; KEGG: sag:SAG1593 0.0014 rluB; ribosomal large subunit pseudouridine synthase B K06178; COG: COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); Psort location: Cytoplasmic, score:8.87. | Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.883 |
EDP11528.1 | rplQ | EUBDOL_00706 | EUBDOL_00540 | S4 domain protein; KEGG: sag:SAG1593 0.0014 rluB; ribosomal large subunit pseudouridine synthase B K06178; COG: COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); Psort location: Cytoplasmic, score:8.87. | COG: COG0203 Ribosomal protein L17; Psort location: Cytoplasmic, score:8.87. | 0.893 |
EDP11528.1 | rplS | EUBDOL_00706 | EUBDOL_01191 | S4 domain protein; KEGG: sag:SAG1593 0.0014 rluB; ribosomal large subunit pseudouridine synthase B K06178; COG: COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); Psort location: Cytoplasmic, score:8.87. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.923 |
EDP11528.1 | rplT | EUBDOL_00706 | EUBDOL_01907 | S4 domain protein; KEGG: sag:SAG1593 0.0014 rluB; ribosomal large subunit pseudouridine synthase B K06178; COG: COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); Psort location: Cytoplasmic, score:8.87. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.879 |
EDP11528.1 | rplV | EUBDOL_00706 | EUBDOL_00560 | S4 domain protein; KEGG: sag:SAG1593 0.0014 rluB; ribosomal large subunit pseudouridine synthase B K06178; COG: COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); Psort location: Cytoplasmic, score:8.87. | Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.880 |
EDP11528.1 | rpmA | EUBDOL_00706 | EUBDOL_01314 | S4 domain protein; KEGG: sag:SAG1593 0.0014 rluB; ribosomal large subunit pseudouridine synthase B K06178; COG: COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); Psort location: Cytoplasmic, score:8.87. | COG: COG0211 Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.877 |
EDP11528.1 | rpmB | EUBDOL_00706 | EUBDOL_01453 | S4 domain protein; KEGG: sag:SAG1593 0.0014 rluB; ribosomal large subunit pseudouridine synthase B K06178; COG: COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); Psort location: Cytoplasmic, score:8.87. | COG: COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.889 |
FbpA | EDP11528.1 | EUBDOL_01909 | EUBDOL_00706 | COG: COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP; Psort location: Cytoplasmic, score:8.87. | S4 domain protein; KEGG: sag:SAG1593 0.0014 rluB; ribosomal large subunit pseudouridine synthase B K06178; COG: COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); Psort location: Cytoplasmic, score:8.87. | 0.929 |
FbpA | rplB | EUBDOL_01909 | EUBDOL_00562 | COG: COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP; Psort location: Cytoplasmic, score:8.87. | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.891 |
FbpA | rplM | EUBDOL_01909 | EUBDOL_00430 | COG: COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP; Psort location: Cytoplasmic, score:8.87. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.914 |
FbpA | rplN | EUBDOL_01909 | EUBDOL_00555 | COG: COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP; Psort location: Cytoplasmic, score:8.87. | Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.881 |
FbpA | rplQ | EUBDOL_01909 | EUBDOL_00540 | COG: COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP; Psort location: Cytoplasmic, score:8.87. | COG: COG0203 Ribosomal protein L17; Psort location: Cytoplasmic, score:8.87. | 0.808 |
FbpA | rplS | EUBDOL_01909 | EUBDOL_01191 | COG: COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP; Psort location: Cytoplasmic, score:8.87. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.856 |
FbpA | rplT | EUBDOL_01909 | EUBDOL_01907 | COG: COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP; Psort location: Cytoplasmic, score:8.87. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.808 |
FbpA | rplV | EUBDOL_01909 | EUBDOL_00560 | COG: COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP; Psort location: Cytoplasmic, score:8.87. | Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.872 |
FbpA | rpmA | EUBDOL_01909 | EUBDOL_01314 | COG: COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP; Psort location: Cytoplasmic, score:8.87. | COG: COG0211 Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.808 |
FbpA | rpmB | EUBDOL_01909 | EUBDOL_01453 | COG: COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP; Psort location: Cytoplasmic, score:8.87. | COG: COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.808 |