STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP11537.1LPXTG-motif cell wall anchor domain protein; KEGG: cal:orf19.4072 0.0093 HYR10; similar to cell surface flocculin K01186; COG: NOG22227 non supervised orthologous group; Psort location: Cellwall, score:9.98. (478 aa)    
Predicted Functional Partners:
EDP11536.1
COG: COG3764 Sortase (surface protein transpeptidase).
 
  
 0.972
EDP11383.1
COG: COG3764 Sortase (surface protein transpeptidase).
 
  
 0.882
EDP11384.1
COG: COG3764 Sortase (surface protein transpeptidase).
 
  
 0.882
EDP11535.1
Hypothetical protein.
    
 0.874
EDP11538.1
LPXTG-motif cell wall anchor domain protein; KEGG: bme:BMEII0148 5.9e-10 extracellular serine protease; COG: COG3468 Type V secretory pathway, adhesin AidA; Psort location: Cellwall, score:9.91.
     
0.779
pyk
Pyruvate kinase; KEGG: bce:BC4599 1.3e-131 pyruvate kinase K00873; COG: COG0469 Pyruvate kinase; Psort location: Cytoplasmic, score:8.87.
   
    0.625
EDP11584.1
RDD family protein; COG: COG4767 Glycopeptide antibiotics resistance protein; Psort location: CytoplasmicMembrane, score:9.99.
  
 
 0.520
EDP12242.1
Hypothetical protein; COG: NOG23393 non supervised orthologous group.
 
  
  0.510
EDP10453.1
Hypothetical protein; KEGG: ljo:LJ1840 4.0e-05 cell wall-associated serine proteinase K01361; COG: NOG23393 non supervised orthologous group.
 
  
  0.493
EDP11290.1
Collagen triple helix repeat protein; KEGG: gga:418942 8.8e-16 LOC418942; similar to Mitochondrial intermediate peptidase K01410; COG: NOG09575 non supervised orthologous group.
    
 0.467
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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