STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP11548.1KEGG: lsl:LSL_1949 8.3e-57 PTS system, mannose-specific IID component K00890; COG: COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID; Psort location: CytoplasmicMembrane, score:10.00. (275 aa)    
Predicted Functional Partners:
EDP11549.1
KEGG: lsl:LSL_1950 2.0e-55 PTS system, mannose-specific IIC component K00890; COG: COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC; Psort location: CytoplasmicMembrane, score:10.00.
 0.999
EDP12171.1
KEGG: lsl:LSL_1715 7.6e-31 PTS system, mannose-specific IIC component K00890; COG: COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC; Psort location: CytoplasmicMembrane, score:10.00.
 0.988
EDP11506.1
KEGG: lsl:LSL_1950 9.8e-54 PTS system, mannose-specific IIC component K00890; COG: COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC; Psort location: CytoplasmicMembrane, score:10.00.
 0.984
EDP10889.1
KEGG: eci:UTI89_C3570 4.3e-28 agaC; PTS system, N-acetylgalactosamine-specific IIC component 1 K02746; COG: COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC; Psort location: CytoplasmicMembrane, score:10.00.
 0.981
agaC
KEGG: eci:UTI89_C3570 4.0e-80 agaC; PTS system, N-acetylgalactosamine-specific IIC component 1 K02746; COG: COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC; Psort location: CytoplasmicMembrane, score:9.99.
 0.973
EDP11546.1
KEGG: lsl:LSL_1951 6.6e-32 PTS system, mannose-specific IIAB component K00890; COG: COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB; Psort location: Cytoplasmic, score:9.98.
 
 0.970
EDP11550.1
KEGG: pca:Pcar_1934 5.6e-19 PTS system, IIA component, putative K02793; COG: COG2893 Phosphotransferase system, mannose/fructose-specific component IIA; Psort location: Cytoplasmic, score:8.87.
 
 0.958
EDP10267.1
PTS system sorbose-specific iic component; KEGG: lpl:lp_2649 8.5e-32 pts19C; N-acetylgalactosamine PTS, EIIC K02746; COG: COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.918
EDP11508.1
PTS system fructose IIA component; KEGG: tte:TTE0192 3.8e-20 manX; Phosphotransferase system, mannose/fructose-specific component IIA K02793; COG: COG2893 Phosphotransferase system, mannose/fructose-specific component IIA; Psort location: Cytoplasmic, score:8.87.
 
 0.902
EDP11492.1
KEGG: cpf:CPF_2965 1.1e-15 PTS system, IIA component K02793; COG: COG2893 Phosphotransferase system, mannose/fructose-specific component IIA; Psort location: Cytoplasmic, score:8.87.
 
 0.900
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.