STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP11738.1Phosphotransferase system, EIIC; KEGG: lpl:lp_0886 1.3e-115 pts11BC; beta-glucosides PTS, EIIBC K02756:K02757; COG: COG1264 Phosphotransferase system IIB components; Psort location: CytoplasmicMembrane, score:10.00. (465 aa)    
Predicted Functional Partners:
ptbA-5
PTS system, glucose subfamily, IIA component; KEGG: lac:LBA0401 4.1e-29 scrA; sucrose PTS II ABC K02808:K02809:K02810; COG: COG2190 Phosphotransferase system IIA components; Psort location: Cytoplasmic, score:9.98.
 0.999
EDP12152.1
ROK family protein; KEGG: bha:BH0797 2.8e-49 glucose kinase K00845; COG: COG1940 Transcriptional regulator/sugar kinase; Psort location: Cytoplasmic, score:9.98.
  
 0.997
ptbA-4
KEGG: sag:SAG0790 3.0e-32 PTS system, beta-glucosides-specific IIABC components K02755:K02756:K02757; COG: COG2190 Phosphotransferase system IIA components; Psort location: Cytoplasmic, score:9.98.
 0.997
EDP10189.1
Phosphotransferase system, EIIC; KEGG: btk:BT9727_0877 5.2e-80 bglP; probable PTS system, beta-glucoside-specific enzyme II, ABC component K02755:K02756:K02757; COG: COG2190 Phosphotransferase system IIA components; Psort location: CytoplasmicMembrane, score:10.00.
 
0.995
ptbA
KEGG: ldb:Ldb1823 5.0e-27 PTS system, glucose/glucoside-specific enzyme IIA component K00890; COG: COG2190 Phosphotransferase system IIA components; Psort location: CytoplasmicMembrane, score:9.49.
 0.994
ptbA-2
PTS system, glucose subfamily, IIA component; KEGG: sha:SH1484 1.2e-25 phosphotransferase system enzyme IIA-like protein K02777; COG: COG2190 Phosphotransferase system IIA components; Psort location: Cytoplasmic, score:9.98.
 0.994
ptbA-3
KEGG: bcl:ABC1773 6.0e-31 PTS system, glucose-specific enzyme II, A component K02777; COG: COG2190 Phosphotransferase system IIA components; Psort location: CytoplasmicMembrane, score:9.49.
 0.994
ptbA-6
KEGG: ldb:Ldb1823 5.0e-27 PTS system, glucose/glucoside-specific enzyme IIA component K00890; COG: COG2190 Phosphotransferase system IIA components; Psort location: CytoplasmicMembrane, score:9.49.
 0.994
cscA-2
Sucrose-6-phosphate hydrolase; KEGG: bli:BL03892 3.4e-60 sacAA; sucrase-6-phosphate hydrolase K01193; COG: COG1621 Beta-fructosidases (levanase/invertase); Psort location: Cytoplasmic, score:9.65.
 
 0.981
EDP10187.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1; KEGG: lla:L146642 2.3e-22 yleE; beta-glucoside-specific PTS system IIA component K02755; COG: COG2190 Phosphotransferase system IIA components; Psort location: Cytoplasmic, score:9.98.
 0.974
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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