STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP11740.1Putative benzyl esterase AreA; KEGG: sai:Saci_1116 1.5e-25 acetyl esterase K01066; COG: COG0657 Esterase/lipase; Psort location: Cytoplasmic, score:9.98. (298 aa)    
Predicted Functional Partners:
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score:8.87.
  
   0.864
EDP12248.1
Hypothetical protein; KEGG: bce:BC0399 4.5e-81 oxidoreductase; COG: COG0723 Rieske Fe-S protein.
 
 
 0.855
cscA-2
Sucrose-6-phosphate hydrolase; KEGG: bli:BL03892 3.4e-60 sacAA; sucrase-6-phosphate hydrolase K01193; COG: COG1621 Beta-fructosidases (levanase/invertase); Psort location: Cytoplasmic, score:9.65.
     
 0.782
EDP11348.1
Peptidase, M16 family; KEGG: bcz:BCZK3546 1.3e-67 insulysin, peptidase family M16 (insulinase) K01408; COG: COG0612 Predicted Zn-dependent peptidases; Psort location: Cytoplasmic, score:8.87.
    
 
 0.781
EDP11349.1
Peptidase M16 inactive domain protein; KEGG: lwe:lwe1408 4.9e-52 zinc metallopeptidase, putative K01423; COG: COG0612 Predicted Zn-dependent peptidases; Psort location: Cytoplasmic, score:8.87.
    
 
 0.781
EDP11742.1
Kinase, PfkB family; KEGG: ser:SERP1494 1.3e-69 fructokinase, putative K00847; COG: COG0524 Sugar kinases, ribokinase family; Psort location: Cytoplasmic, score:9.98.
  
    0.780
EDP11739.1
Hypothetical protein; KEGG: lsl:LSL_1486 1.9e-34 aes; endo-1,4-beta-xylanase K01181; COG: COG0657 Esterase/lipase; Psort location: Cytoplasmic, score:8.87.
     
 0.779
EDP10472.1
Ankyrin repeat protein; KEGG: xla:444232 9.8e-20 MGC80792; MGC80792 protein K01932; COG: COG0666 FOG: Ankyrin repeat; Psort location: Cytoplasmic, score:8.87.
    
 0.696
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
    
   0.634
nadE
NAD+ synthase; KEGG: tte:TTE0640 9.4e-49 nadE; NAD synthase K01950; COG: COG0388 Predicted amidohydrolase; Belongs to the NAD synthetase family.
   
 0.618
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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