STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP11804.1Hypothetical protein; Psort location: CytoplasmicMembrane, score:9.99. (243 aa)    
Predicted Functional Partners:
EDP11801.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_0251 8.6e-23 ATPase; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score:9.49.
       0.773
EDP11802.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score:10.00.
       0.773
EDP11803.1
Hypothetical protein; KEGG cal:orf19.2082 0.0025 Gpi-anchored aspartic protease.
       0.773
EDP11805.1
KEGG: bcz:BCZK3833 7.1e-12 transcriptional regulator, GntR family; COG: COG1725 Predicted transcriptional regulators.
       0.613
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.