STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP11808.1KEGG: reh:H16_A2208 5.8e-07 rhodanese-like: transcriptional regulator, ArsR family; COG: COG0640 Predicted transcriptional regulators; Psort location: Cytoplasmic, score:8.87. (130 aa)    
Predicted Functional Partners:
EDP11807.1
Transcriptional regulator, AraC family; KEGG: bce:BC3740 1.1e-10 ADA regulatory protein K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score:9.98.
  
 0.983
EDP11809.1
Heavy metal-associated domain protein; KEGG: fnu:FN0259 3.6e-08 zinc-transporting ATPase K01534; COG: COG2217 Cation transport ATPase; Psort location: Cytoplasmic, score:8.87.
 
  
 0.906
cadA
Cadmium-exporting ATPase; KEGG: bce:BC0596 5.4e-188 zinc-transporting ATPase K01534; COG: COG2217 Cation transport ATPase; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.853
EDP11811.1
KEGG: rru:Rru_A1450 1.9e-05 transcriptional regulator, ArsR family; COG: COG0640 Predicted transcriptional regulators; Psort location: Cytoplasmic, score:8.87.
 
     0.847
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score:8.87.
     
 0.611
cobB
Transcriptional regulator, Sir2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.
  
 
  0.529
EDP11089.1
Hydrolase, NUDIX family; KEGG: spn:SP_0989 4.9e-36 ADP-ribose pyrophosphatase K01515; COG: COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; Psort location: Cytoplasmic, score:8.87.
    
  0.486
ndk
KEGG: mst:Msp_0630 2.9e-15 ndk; nucleoside diphosphate kinase K00940; COG: COG0105 Nucleoside diphosphate kinase; Psort location: Cytoplasmic, score:8.87.
    
  0.476
nadK
NAD(+)/NADH kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
  
 
  0.475
nadE
NAD+ synthase; KEGG: tte:TTE0640 9.4e-49 nadE; NAD synthase K01950; COG: COG0388 Predicted amidohydrolase; Belongs to the NAD synthetase family.
    
  0.468
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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