STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pstCPhosphate ABC transporter, permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (312 aa)    
Predicted Functional Partners:
EDP11113.1
Hypothetical protein; KEGG: mst:Msp_0343 1.6e-16 pstS; PstS K02040; COG: COG0226 ABC-type phosphate transport system, periplasmic component.
 
 
 0.999
pstA
Phosphate ABC transporter, permease protein PstA; KEGG: hpa:HPAG1_0451 3.0e-10 molybdenum ABC transporter ModB K06022; COG: COG0581 ABC-type phosphate transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
 
0.999
pstB
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
 0.999
phoU
Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake.
 
  
 0.963
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
     
 0.524
prkC
Serine/threonine-protein kinase PrkC; KEGG: lsa:LSA0692 1.5e-91 putative serine/threonine protein kinase K08884; COG: COG0515 Serine/threonine protein kinase; Psort location: CytoplasmicMembrane, score:9.49.
     
 0.495
EDP10973.1
Kinase domain protein; KEGG: cac:CAC0404 6.3e-27 serine/threonine protein kinase fused to TPR repeats domain K08884; COG: COG0515 Serine/threonine protein kinase; Psort location: CytoplasmicMembrane, score:9.49.
     
 0.484
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
      0.470
EDP11119.1
KEGG: ssp:SSP1187 6.5e-18 diacylglycerol kinase K00901; COG: COG0818 Diacylglycerol kinase; Psort location: CytoplasmicMembrane, score:9.99.
       0.454
EDP11112.1
Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: btl:BALH_4098 8.0e-36 dacF; D-alanyl-D-alanine carboxypeptidase K01286; COG: COG1876 D-alanyl-D-alanine carboxypeptidase; Psort location: Cytoplasmic, score:9.36.
       0.416
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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