STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP11135.1KEGG: bcz:BCZK2802 1.5e-80 pbp2; penicillin-binding protein 2 K05364; COG: COG0768 Cell division protein FtsI/penicillin-binding protein 2; Psort location: CytoplasmicMembrane, score:9.82. (597 aa)    
Predicted Functional Partners:
EDP11002.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: gsu:GSU3075 2.5e-54 penicillin-binding protein K03587; COG: COG0768 Cell division protein FtsI/penicillin-binding protein 2; Psort location: CytoplasmicMembrane, score:9.82.
 
  
 0.969
EDP11577.1
Cell cycle protein, FtsW/RodA/SpoVE family; COG: COG0772 Bacterial cell division membrane protein; Psort location: CytoplasmicMembrane, score:10.00; Belongs to the SEDS family.
 
 
 0.962
mreC
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.951
EDP10563.1
POTRA domain protein, FtsQ-type; COG: COG1589 Cell division septal protein; Psort location: CytoplasmicMembrane, score:9.97.
 
 
 0.917
EDP12396.1
Cell cycle protein, FtsW/RodA/SpoVE family; COG: COG0772 Bacterial cell division membrane protein; Psort location: CytoplasmicMembrane, score:10.00; Belongs to the SEDS family.
 
 
 0.905
ftsW
COG: COG0772 Bacterial cell division membrane protein; Psort location: CytoplasmicMembrane, score:10.00; Belongs to the SEDS family.
 
 
 0.903
EDP11003.1
KEGG: tte:TTE1916 1.6e-101 ftsI4; Cell division protein FtsI/penicillin-binding protein 2 K03587; COG: COG0768 Cell division protein FtsI/penicillin-binding protein 2; Psort location: CytoplasmicMembrane, score:9.49.
  
  
0.872
EDP11361.1
KEGG: btl:BALH_1401 8.5e-87 penicillin-binding protein; COG: COG0744 Membrane carboxypeptidase (penicillin-binding protein); Psort location: Extracellular, score:9.55.
 
 
 0.867
EDP11364.1
Transglycosylase; KEGG: spn:SP_0369 1.3e-63 penicillin-binding protein 1A K05366; COG: COG0744 Membrane carboxypeptidase (penicillin-binding protein); Psort location: Extracellular, score:9.55.
 
 
 0.860
EDP11434.1
Transglycosylase; KEGG: bha:BH3812 2.5e-103 penicillin-binding protein K05366; COG: COG0744 Membrane carboxypeptidase (penicillin-binding protein); Psort location: Extracellular, score:9.55.
 
 
 0.854
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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