STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP11222.1Response regulator receiver domain protein; KEGG: eci:UTI89_C5174 7.4e-17 arcA; ArcA transcriptional dual regulator K07773; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score:9.98. (133 aa)    
Predicted Functional Partners:
EDP11218.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cpf:CPF_0116 9.5e-56 sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:9.49.
 0.972
EDP11111.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: tte:TTE2688 4.1e-48 baeS12; sensory transduction histidine kinases K07652; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:9.49.
 
 0.966
EDP10126.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cpe:CPE0841 3.7e-77 two-component sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:9.49.
 0.963
EDP12342.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bcl:ABC1176 6.7e-39 two-component sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:7.84.
 
 0.957
EDP10761.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: stl:stu1335 4.1e-55 hk07; sensor histidine kinase (homolog to HK01Spn & Sth); COG: COG0642 Signal transduction histidine kinase; Psort location: Cytoplasmic, score:8.87.
 0.956
EDP12237.1
KEGG: ecp:ECP_2406 1.0e-31 hypothetical protein YpdA K07704; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; Psort location: Cytoplasmic, score:8.87.
   
 0.921
EDP12343.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bcz:BCZK0246 1.8e-25 sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: Cytoplasmic, score:9.36.
 
 0.912
EDP10646.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ctc:CTC00159 2.7e-35 sensory transduction protein kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:9.88.
 
 0.893
EDP11671.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lin:pli0050 7.9e-116 similar to the two components sensor protein kdpD K07646; COG: COG2205 Osmosensitive K+ channel histidine kinase; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.890
EDP10873.1
KEGG: cpr:CPR_0449 1.7e-79 sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.888
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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