STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP11241.1SNARE-like domain protein; KEGG: sab:SAB2386 0.00028 probable alkaline phosphatase K01077; COG: COG1238 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:9.97. (185 aa)    
Predicted Functional Partners:
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score:8.87.
     
 0.641
EDP11242.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
       0.620
pncB
Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
 
  
  0.570
pgsA
KEGG: lsa:LSA0486 6.7e-39 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995; COG: COG0558 Phosphatidylglycerophosphate synthase; Psort location: CytoplasmicMembrane, score:9.99; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.499
EDP10852.1
KEGG: sac:SACOL1236 1.7e-26 thiamine pyrophosphokinase K00949; COG: COG1564 Thiamine pyrophosphokinase; Psort location: Cytoplasmic, score:8.87.
    
  0.492
EDP11925.1
Hydrolase, NUDIX family; KEGG: lsa:LSA1097 8.1e-05 putative ADP-ribose phosphorylase, NUDIX family K01515; COG: COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; Psort location: Cytoplasmic, score:8.87.
    
 0.483
EDP11475.1
Mutator mutT protein; KEGG: mst:Msp_0006 5.6e-19 predicted NUDIX-related protein K03574; COG: COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; Psort location: Cytoplasmic, score:8.87.
    
 0.483
EDP10161.1
KEGG: btl:BALH_4359 6.6e-06 MutT/NUDIX family protein K01529; COG: COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; Psort location: Cytoplasmic, score:8.87.
    
 0.483
EDP11022.1
Rubredoxin; KEGG: fnu:FN1424 2.4e-265 acyl-CoA dehydrogenase, short-chain specific K00248; COG: COG2025 Electron transfer flavoprotein, alpha subunit; Psort location: Cytoplasmic, score:9.98.
  
  
 0.482
EDP11243.1
Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
     
 0.445
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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