STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP11287.1Hypothetical protein. (54 aa)    
Predicted Functional Partners:
EDP11288.1
KEGG: sha:SH0214 0.00020 hypothetical protein K00135; Psort location: Cytoplasmic, score:8.87.
       0.718
EDP11289.1
Hypothetical protein.
       0.713
EDP11290.1
Collagen triple helix repeat protein; KEGG: gga:418942 8.8e-16 LOC418942; similar to Mitochondrial intermediate peptidase K01410; COG: NOG09575 non supervised orthologous group.
       0.703
EDP11291.1
Hypothetical protein; COG: NOG18825 non supervised orthologous group.
       0.698
EDP11292.1
Phage minor structural protein, N-terminal domain protein; COG: NOG18824 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
       0.698
EDP11293.1
Putative phage tail component domain protein; COG: NOG18823 non supervised orthologous group.
       0.698
EDP11294.1
Phage tail tape measure protein, TP901 family; KEGG: cal:orf19.6763 0.0013 SLK19; protein involved in control of spindle dynamics together with kar3p K00870; COG: COG5283 Phage-related tail protein.
       0.698
EDP11284.1
CHAP domain protein; KEGG: spk:MGAS9429_Spy0849 9.9e-22 lysozyme K01185; COG: COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase).
       0.570
EDP11285.1
Hypothetical protein.
       0.570
EDP11286.1
Holin, phage phi LC3 family; COG: COG5546 Small integral membrane protein.
       0.570
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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