STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP11290.1Collagen triple helix repeat protein; KEGG: gga:418942 8.8e-16 LOC418942; similar to Mitochondrial intermediate peptidase K01410; COG: NOG09575 non supervised orthologous group. (239 aa)    
Predicted Functional Partners:
EDP11294.1
Phage tail tape measure protein, TP901 family; KEGG: cal:orf19.6763 0.0013 SLK19; protein involved in control of spindle dynamics together with kar3p K00870; COG: COG5283 Phage-related tail protein.
 
 
   0.945
EDP11291.1
Hypothetical protein; COG: NOG18825 non supervised orthologous group.
  
 0.932
EDP11293.1
Putative phage tail component domain protein; COG: NOG18823 non supervised orthologous group.
   
   0.928
EDP12257.1
Hypothetical protein; KEGG: bta:282514 0.0030 PAFAH1B2; platelet-activating factor acetylhydrolase, isoform Ib, beta subunit (30kD) K01062; COG: COG2755 Lysophospholipase L1 and related esterases.
  
  0.825
EDP11350.1
FtsK/SpoIIIE family protein; KEGG: pen:PSEEN2212 8.8e-101 ftsK; cell division protein FtsK; COG: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; Psort location: CytoplasmicMembrane, score:9.99; Belongs to the FtsK/SpoIIIE/SftA family.
   
 
 0.808
EDP10976.1
FtsK/SpoIIIE family protein; KEGG: reh:H16_A1582 1.3e-08 DNA segregation ATPase FtsK/SpoIIIE related protein; COG: COG1716 FOG: FHA domain; Psort location: CytoplasmicMembrane, score:7.80.
   
 
 0.808
EDP11292.1
Phage minor structural protein, N-terminal domain protein; COG: NOG18824 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
       0.778
EDP11289.1
Hypothetical protein.
       0.762
EDP11288.1
KEGG: sha:SH0214 0.00020 hypothetical protein K00135; Psort location: Cytoplasmic, score:8.87.
       0.756
EDP11951.1
Peptidase, S41 family; KEGG: bsu:BG11794 1.1e-59 ctpA, yzbD; carboxy-terminal processing protease K03797; COG: COG0793 Periplasmic protease; Psort location: Cytoplasmic, score:8.87; Belongs to the peptidase S41A family.
  
   0.746
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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