STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP11311.1Hypothetical protein; KEGG pfa:MAL3P1.1 0.0021 PFC0105w; serine/threonine protein kinase, putative K00870. (298 aa)    
Predicted Functional Partners:
EDP11310.1
COG: COG3728 Phage terminase, small subunit; Psort location: Cytoplasmic, score:8.87.
       0.534
EDP11307.1
Hypothetical protein; COG: NOG17345 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
       0.533
EDP11308.1
Phage minor capsid protein; COG: NOG25118 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
       0.533
EDP11309.1
Phage terminase, large subunit, PBSX family; COG: COG1783 Phage terminase large subunit; Psort location: Cytoplasmic, score:8.87.
       0.533
EDP11306.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
       0.523
EDP11312.1
Hypothetical protein.
       0.416
EDP11313.1
Hypothetical protein.
       0.416
EDP11314.1
KEGG: bld:BLi01983 0.0071 hypothetical protein K01472; Psort location: Cytoplasmic, score:8.87.
       0.416
EDP11315.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
       0.416
EDP11316.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
       0.413
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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