STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP11031.1ABC transporter, permease protein; KEGG: cdi:DIP0495 8.5e-10 putative molybdenum ABC transport system (integral membrane and ATP-binding proteins) K02017:K02018; COG: COG1177 ABC-type spermidine/putrescine transport system, permease component II; Psort location: CytoplasmicMembrane, score:10.00. (269 aa)    
Predicted Functional Partners:
EDP11030.1
ABC transporter, permease protein; KEGG: hpa:HPAG1_0451 3.1e-13 molybdenum ABC transporter ModB K06022; COG: COG1176 ABC-type spermidine/putrescine transport system, permease component I; Psort location: CytoplasmicMembrane, score:10.00.
 
0.999
EDP11032.1
ABC transporter, solute-binding protein; KEGG: cje:Cj0104 0.0017 atpH; ATP synthase F1 sector delta subunit K02113; COG: COG0687 Spermidine/putrescine-binding periplasmic protein.
 
 0.999
potA
Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 0.998
EDP11970.1
KEGG: bca:BCE_1437 3.3e-62 ABC transporter, ATP-binding protein K02010; COG: COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Psort location: CytoplasmicMembrane, score:9.49.
 
 0.937
EDP12020.1
KEGG: mcp:MCAP_0202 1.3e-58 spermidine/putrescine ABC transporter, ATP-binding protein K02052; COG: COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Psort location: CytoplasmicMembrane, score:9.49.
  
 0.850
EDP11028.1
Cupin domain protein; KEGG: psp:PSPPH_2917 1.5e-09 DNA-binding protein K00517; COG: COG1396 Predicted transcriptional regulators; Psort location: Cytoplasmic, score:8.87.
 
     0.807
EDP10451.1
KEGG: sth:STH1782 1.3e-67 sugar ABC transportor ATP-binding protein K05816; COG: COG3839 ABC-type sugar transport systems, ATPase components; Psort location: CytoplasmicMembrane, score:9.49; Belongs to the ABC transporter superfamily.
  
 0.784
EDP11528.1
S4 domain protein; KEGG: sag:SAG1593 0.0014 rluB; ribosomal large subunit pseudouridine synthase B K06178; COG: COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); Psort location: Cytoplasmic, score:8.87.
   
    0.568
EDP11969.1
Putative 2-aminoethylphosphonate ABC transporter, permease protein; KEGG: hpa:HPAG1_0451 1.6e-10 molybdenum ABC transporter ModB K06022; COG: COG1178 ABC-type Fe3+ transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
  
  0.563
EDP11971.1
ABC transporter, solute-binding protein; COG: COG1840 ABC-type Fe3+ transport system, periplasmic component.
  
 
  0.510
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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