STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP11053.1Glycerate kinase; KEGG: tte:TTE2616 7.0e-76 glycerate kinase K00865; COG: COG1929 Glycerate kinase; Psort location: Cytoplasmic, score:8.87; Belongs to the glycerate kinase type-1 family. (383 aa)    
Predicted Functional Partners:
gpmI
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the BPG-independent phosphoglycerate mutase family.
     
 0.917
EDP10527.1
KEGG: tde:TDE2512 2.7e-131 aldehyde dehydrogenase (NADP) family protein K00128; COG: COG1012 NAD-dependent aldehyde dehydrogenases; Psort location: Cytoplasmic, score:9.98.
   
 
 0.917
tadA
Cytidine and deoxycytidylate deaminase zinc-binding region; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
 
 
    0.902
agcS
Amino acid carrier protein; KEGG: hpa:HPAG1_0925 1.0e-65 D-alanine glycine permease K01613; COG: COG1115 Na+/alanine symporter; Psort location: CytoplasmicMembrane, score:10.00.
       0.787
pyrC
Amidohydrolase family protein; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
 
 
 0.719
EDP10682.1
Putative endoribonuclease L-PSP; KEGG: ape:APE_1501.1 6.8e-23 ribonuclease UK114; COG: COG0251 Putative translation initiation inhibitor, yjgF family; Psort location: Cytoplasmic, score:8.87.
 
    0.661
EDP10799.1
Phosphogluconate dehydrogenase (decarboxylating), NAD binding domain protein; KEGG: bca:BCE_4109 3.2e-71 2-hydroxy-3-oxopropionate reductase K00042; COG: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; Psort location: Cytoplasmic, score:8.87.
  
 
 0.576
EDP11051.1
DJ-1 family protein; KEGG: gme:Gmet_2409 5.5e-21 peptidase C56, PfpI K05520; COG: COG0693 Putative intracellular protease/amidase; Psort location: Cytoplasmic, score:8.87.
       0.566
murD
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
      0.558
EDP11054.1
KEGG: rru:Rru_A1450 3.5e-11 transcriptional regulator, ArsR family; COG: COG0640 Predicted transcriptional regulators.
       0.515
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.