STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP10824.1Transcriptional regulator, MarR family; COG: COG1846 Transcriptional regulators; Psort location: Cytoplasmic, score:8.87. (155 aa)    
Predicted Functional Partners:
ptbA-5
PTS system, glucose subfamily, IIA component; KEGG: lac:LBA0401 4.1e-29 scrA; sucrose PTS II ABC K02808:K02809:K02810; COG: COG2190 Phosphotransferase system IIA components; Psort location: Cytoplasmic, score:9.98.
   
 
 0.916
EDP10189.1
Phosphotransferase system, EIIC; KEGG: btk:BT9727_0877 5.2e-80 bglP; probable PTS system, beta-glucoside-specific enzyme II, ABC component K02755:K02756:K02757; COG: COG2190 Phosphotransferase system IIA components; Psort location: CytoplasmicMembrane, score:10.00.
   
 
 0.916
EDP10825.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_1327 5.4e-69 ATPase K06147; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score:10.00.
     
 0.789
EDP10826.1
ABC transporter transmembrane region; KEGG: cch:Cag_0453 2.0e-87 ATPase K06147; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score:9.99.
     
 0.789
EDP11447.1
KEGG: bbu:BBB29 2.3e-84 malX; PTS system, maltose and glucose-specific IIBC component K02790:K02791; COG: COG1264 Phosphotransferase system IIB components; Psort location: CytoplasmicMembrane, score:9.99.
     
 0.679
EDP11738.1
Phosphotransferase system, EIIC; KEGG: lpl:lp_0886 1.3e-115 pts11BC; beta-glucosides PTS, EIIBC K02756:K02757; COG: COG1264 Phosphotransferase system IIB components; Psort location: CytoplasmicMembrane, score:10.00.
     
 0.679
EDP10694.1
Phosphotransferase system, EIIC; KEGG: plu:plu1989 8.0e-107 unnamed protein product; highly similar to phosphotransferase system enzyme II K02790:K02791; COG: COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific; Psort location: CytoplasmicMembrane, score:10.00.
     
 0.679
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score:8.87.
  
  
 0.539
EDP11022.1
Rubredoxin; KEGG: fnu:FN1424 2.4e-265 acyl-CoA dehydrogenase, short-chain specific K00248; COG: COG2025 Electron transfer flavoprotein, alpha subunit; Psort location: Cytoplasmic, score:9.98.
  
 
 0.537
EDP12152.1
ROK family protein; KEGG: bha:BH0797 2.8e-49 glucose kinase K00845; COG: COG1940 Transcriptional regulator/sugar kinase; Psort location: Cytoplasmic, score:9.98.
   
 
 0.530
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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