STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP10871.1SNARE-like domain protein; KEGG: pat:Patl_0395 1.0e-05 pyridine nucleotide-disulphide oxidoreductase dimerisation region K00520; COG: COG0398 Uncharacterized conserved protein; Psort location: CytoplasmicMembrane, score:9.99. (186 aa)    
Predicted Functional Partners:
EDP10872.1
Response regulator receiver domain protein; KEGG: ava:Ava_1878 7.5e-40 two component transcriptional regulator, winged helix family K07659; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score:9.98.
  
    0.603
EDP10873.1
KEGG: cpr:CPR_0449 1.7e-79 sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:10.00.
       0.592
EDP10870.1
Heavy metal-associated domain protein; KEGG: sat:SYN_01290 1.2e-09 copper-exporting ATPase K01533; COG: COG2217 Cation transport ATPase.
  
  
 0.566
EDP11895.1
Phospholipase D domain protein; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
    
  0.497
EDP10785.1
Phospholipase, patatin family; KEGG: vfi:VFA0714 4.8e-12 serine protease; COG: COG4667 Predicted esterase of the alpha-beta hydrolase superfamily; Psort location: Cytoplasmic, score:8.87.
    
  0.496
EDP11119.1
KEGG: ssp:SSP1187 6.5e-18 diacylglycerol kinase K00901; COG: COG0818 Diacylglycerol kinase; Psort location: CytoplasmicMembrane, score:9.99.
    
  0.483
EDP11596.1
Methyltransferase domain protein; KEGG: btk:BT9727_3407 2.6e-19 possible ubiquinone/menaquinone methyltransferase K00599; COG: COG0500 SAM-dependent methyltransferases; Psort location: Cytoplasmic, score:8.87.
    
  0.481
cdsA
KEGG: oih:OB1591 1.5e-32 cdsA; phosphatidate cytidylyltransferase K00981; COG: COG0575 CDP-diglyceride synthetase; Psort location: CytoplasmicMembrane, score:10.00.
    
  0.481
EDP11789.1
Methyltransferase domain protein; KEGG: rty:RT0613 3.3e-09 ubiG; 3-demethylubiquinone-9 3-methyltransferase K00568; COG: COG0500 SAM-dependent methyltransferases; Psort location: Cytoplasmic, score:8.87.
    
  0.478
EDP11277.1
Methyltransferase domain protein; KEGG: vch:VC2003 1.0e-44 rRNA (guanine-N1-)-methyltransferase K00563; COG: COG0500 SAM-dependent methyltransferases; Psort location: Cytoplasmic, score:8.87.
    
  0.478
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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