STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP10887.1Transcriptional regulator, RpiR family; KEGG: bcn:Bcen_0486 6.3e-28 glucokinase K00845; COG: COG1737 Transcriptional regulators; Psort location: Cytoplasmic, score:8.87. (289 aa)    
Predicted Functional Partners:
ptbA-5
PTS system, glucose subfamily, IIA component; KEGG: lac:LBA0401 4.1e-29 scrA; sucrose PTS II ABC K02808:K02809:K02810; COG: COG2190 Phosphotransferase system IIA components; Psort location: Cytoplasmic, score:9.98.
  
 
 0.928
EDP10189.1
Phosphotransferase system, EIIC; KEGG: btk:BT9727_0877 5.2e-80 bglP; probable PTS system, beta-glucoside-specific enzyme II, ABC component K02755:K02756:K02757; COG: COG2190 Phosphotransferase system IIA components; Psort location: CytoplasmicMembrane, score:10.00.
  
 
 0.928
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score:8.87.
  
 
  0.926
EDP11496.1
SIS domain protein; KEGG: cac:CAC0397 8.2e-06 predicted sugar phosphate aminotransferase involved in capsule formation K08094; COG: COG1737 Transcriptional regulators.
  
     0.773
EDP10694.1
Phosphotransferase system, EIIC; KEGG: plu:plu1989 8.0e-107 unnamed protein product; highly similar to phosphotransferase system enzyme II K02790:K02791; COG: COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 0.704
EDP11447.1
KEGG: bbu:BBB29 2.3e-84 malX; PTS system, maltose and glucose-specific IIBC component K02790:K02791; COG: COG1264 Phosphotransferase system IIB components; Psort location: CytoplasmicMembrane, score:9.99.
  
 
 0.666
EDP11738.1
Phosphotransferase system, EIIC; KEGG: lpl:lp_0886 1.3e-115 pts11BC; beta-glucosides PTS, EIIBC K02756:K02757; COG: COG1264 Phosphotransferase system IIB components; Psort location: CytoplasmicMembrane, score:10.00.
  
 
 0.666
EDP10886.1
Oxidoreductase, NAD-binding domain protein; KEGG: bcz:pE33L466_0294 1.2e-25 iolG; myo-inositol 2-dehydrogenase K00010; COG: COG0673 Predicted dehydrogenases and related proteins; Psort location: Cytoplasmic, score:8.87.
       0.589
EDP11545.1
KDPG and KHG aldolase; KEGG: bli:BL03850 1.8e-36 2-keto-3-deoxygluconate-6-phosphate aldolase K01625:K01650; COG: COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; Psort location: Cytoplasmic, score:9.98.
 
  
 0.580
nagB
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
   
 0.567
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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