STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP10964.1Cation diffusion facilitator family transporter; KEGG: cal:orf19.2410 9.3e-11 IMH1; involved in vesicular transport K01553; COG: NOG16864 non supervised orthologous group. (1475 aa)    
Predicted Functional Partners:
EDP10967.1
Hypothetical protein; KEGG: chu:CHU_2852 1.8e-09 CHU large protein; candidate b-glycosidase, glycoside hydrolase family 8 protein K01238; Psort location: Cellwall, score:9.17.
 
     0.869
EDP10966.1
Carbohydrate binding domain protein; KEGG: cal:orf19.4072 6.2e-10 HYR10; similar to cell surface flocculin K01186; COG: NOG38059 non supervised orthologous group.
 
     0.844
EDP10965.1
Hypothetical protein.
       0.732
EDP10963.1
Hypothetical protein.
       0.651
EDP11759.1
Hypothetical protein; COG: NOG13728 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
  
     0.593
EDP11454.1
Hypothetical protein; COG: NOG13728 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
  
     0.585
EDP11568.1
Hypothetical protein; COG: NOG13728 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
  
     0.556
EDP10440.1
Hypothetical protein; COG: NOG13728 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
  
     0.551
EDP11560.1
Hypothetical protein; COG: NOG13728 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
  
     0.482
EDP10968.1
Hypothetical protein.
       0.474
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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